Let's move to runs!

Here is the table listing the runs registered in the submission. A run is a metadata linking object, and it links a sample to a raw sequencing file through an experiment. You can find more information in our documentation. Also, remember you can customise the table.
The table is customizable!

To modify the table, click on the eye icon . It will display the column options. You can now select the columns you want to see in the table, it will be modified immediately!
You can also filter objects by column!

Do you want to check only the studies with type Epigenetics? You can filter in the Type column! You can filter all columns as well.
You can also sort the registered objects!

In addition, you can sort the results in ascending or descending order.
You can select all objects!

You can select individual objects in the table by clicking in the checkbox in each row. However, if you want to select all of them, you can select the checkbox at the top. Also, notice the Delete option that appears at the bottom of the table. To delete objects, you can select the object(s) you want to delete, then click on the Delete button that appears.
Let's create a run!

To create a run, you have to click on the Add Run button and start the registration.
Here are the fields for the run metadata object.

To create a run, you first have to select the Format (i.e. Paired FASTQ). Then a new field will appear to add the files. Select which Sample you want to link to the file(s), and the Experiment used to sequence the selected sample to obtain the file.
The last step for registering your run!

Once you are happy with the information added to your run click on the Add button and save it. In case you do not want to save it, click the Reset Form button at the top.
Let’s create multiple runs at once!

So far, you can only create one run at a time. So if you want to register several runs, you can either repeat this process as many times as needed, or select the Batch Upload option.
Download the run template!

Here you can download an empty template to register several runs at once. Click the Download button and fill up the csv.
Upload your file and register the runs!

Once the csv is ready click on the Choose file button, select your runs csv, click Upload, and you're done! In case that you do not want to save the runs registered, click the Reset Form button at the top.

SUBMITTER PORTAL

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BATCH UPLOAD

Batch Upload / Runs

Batch Upload File

Format

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ADD RUN

Add Run

Link

Format File

Sample

Experiment

Register Run

Currently registered runs for this submission

ID Run File Type Files Sample Experiment Creator Updated Created

Status	Run File Type	Files	Sample	Experiment	Creator	Updated	Created

	1	SRF	provisional_id filename accession_id	provisional_id alias accession_id	provisional_id design_description accession_id	demo	04/10/2022	04/10/2022
1 runs

Let's move to runs!

The table is customizable!

You can also filter objects by column!

You can also sort the registered objects!

You can select all objects!

Let's create a run!

Here are the fields for the run metadata object.

The last step for registering your run!

Let’s create multiple runs at once!

Download the run template!

Upload your file and register the runs!

Batch Upload / Runs

Add Run

Link

Register Run

Currently registered runs for this submission